Intro

About me

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I am a Postdoctoral Fellow and La Caixa-Junior Leader at the Centre de Regulació Genòmica in Barcelona. In our lab we use comparative genomics, population genetics and single-cell omics to investigate the evolutionary dynamics of genome regulation and cell type diversity across the eukaryotic tree of life — from animals to protists.

My latest work includes studies on the evolution of environmental resilience in corals, including the unique facultatively symbiotic lifestyle of the Mediterranean coral Oculina patagonica, and the dynamics of cell-level transcriptomic responses to heat stress in Stylophora pistillata. I have also taken a deep dive into the genetic determinants of cell type innovation in animal evolution using using single-cell transcriptomic atlases of four placozoan species.

Partially bleached Oculina patagonica colony

I have also released Possvm, a handy piece of software that can identify and annotate clusters of orthologous genes directly from phylogenetic trees.

Possvm logo

In the past, I worked with David Weetman at the Liverpool School of Tropical Medicine, studying the evolution of insecticide resistance adaptations in Anopheles mosquitoes responsible for malaria transmission as part of the Anopheles gambiae 1000 Genomes project.

I obtained my PhD from the University of Barcelona in 2017, under the supervision of Iñaki Ruiz-Trillo, investigating the origin of multicellularity in animals using comparative genomic analyses of animals and their unicellular relatives.

You can follow my updates in Mastodon (ecoevo.social/@xgrau) or Bluesky (xgrau.bsky.social).

Recent posts

From my blog:

New publication on the evolution of facultative symbiosis in the Mediterranean coral Oculina patagonica

We have recently published a paper on the Mediterranean coral Oculina patagonica, a remarkable and highly resilient species that is able to live and thrive with or without its symbiotic algae — what we usually call “facultative endosymbiosis”.

New paper on cell type evolution in placozoans and the early origin of the neuron expression programme

We have recently published a new paper on cell type evolution in four placozoan species using single-cell transcriptomics. We explore their cell type diversity and study their evolution within the Placozoa phylum and beyond.

New paper on chromatin evolution in eukaryotes

We have recently published a new paper on the evolution of chromatin in eukaryotes:

Recoded protein mixture models for IQ-TREE

I have set up a Github repository with NEXUS files of mixture models for some common amino-acid recoding schemes (Dayhoff6, Dayhoff9, SR4, SR6, KGB6). They can be used in IQ-TREE with the -mdef flag, which allows you to use non-default models.